Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= sp|P33468|HEMA_CVBF Hemagglutinin-esterase precursor (HE) (E3 glycoprotein) - Bovine coronavirus (strain F15). (421 letters)

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF 883,557 sequences; 276,611,002 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs

Taxonomy reports

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33468|HEMA_CVBF  Hemagglutinin-esterase precursor (HE) (...   885   0.0  
gb|AAB19560.1|  HE protein [bovine enteritic coronavirus BEC...   884   0.0  
gb|AAA73152.1|  (M80842) hemagglutinin [bovine coronavirus]       879   0.0  
gb|AAG40590.1|AF230525_1  (AF230525) hemagglutinin-esterase ...   877   0.0  
sp|P31613|HEMA_CVBLY  Hemagglutinin-esterase precursor (HE) ...   876   0.0  
gb|AAG40588.1|AF230523_1  (AF230523) hemagglutinin-esterase ...   873   0.0  
ref|NP_150076.1|  (NC_003045) hemmaglutinin-esterase [bovine...   872   0.0  
gb|AAF25508.1|AF058943_2  (AF058943) hemagglutinin esterase ...   872   0.0  
gb|AAA92990.1|  (L38963) hemagglutinin [bovine coronavirus]       871   0.0  
sp|P15776|HEMA_CVBM  Hemagglutinin-esterase precursor (HE) (...   871   0.0  
gb|AAG40622.1|  (AF239311) hemagglutinin-esterase [bovine co...   871   0.0  
gb|AAF25518.1|AF058944_2  (AF058944) hemagglutinin esterase ...   870   0.0  
sp|P24351|HEMA_CVBQ  Hemagglutinin-esterase precursor (HE) (...   870   0.0  
gb|AAG40593.1|AF230528_1  (AF230528) hemagglutinin-esterase ...   870   0.0  
gb|AAA92989.1|AAA92989  (AF239313) haemagglutinin [bovine co...   869   0.0  
gb|AAA92991.1|  (AF239315) hemagglutinin [bovine coronavirus]     869   0.0  
gb|AAL57307.1|  (AF391542) hemmaglutinin-esterase [bovine co...   869   0.0  
gb|AAG40591.1|AF230526_1  (AF230526) hemagglutinin-esterase ...   868   0.0  
gb|AAG40594.1|  (AF239314) hemagglutinin-esterase [bovine co...   867   0.0  
sp|P30215|HEMA_CVHOC  Hemagglutinin-esterase precursor (HE) ...   846   0.0  
pir||HMIHCC  hemagglutinin-esterase precursor - human corona...   843   0.0  
gb|AAC63044.1|  (AF091734) hemagglutinin-esterase [murine he...   590   e-167
gb|AAF97737.1|AF207551_2  (AF207551) hemagglutinin-esterase ...   532   e-150
sp|Q83356|HEMA_CVMJH  HEMAGGLUTININ-ESTERASE PRECURSOR (HE) ...   531   e-150
gb|AAA46442.1|  (M28348) 2b protein [murine hepatitis virus]      531   e-150
dbj|BAA23718.1|  (AB008939) hemagglutinin-esterase glycoprot...   526   e-148
emb|CAA06776.1|  (AJ005960) hemagglutinin-esterase [Puffinos...   518   e-146
gb|AAA46460.1|  (M64316) hemagglutinin-esterase [murine hepa...   513   e-144
sp|P31614|HEMA_CVMS  Hemagglutinin-esterase precursor (HE) (...   513   e-144
pir||HMIHMH  hemagglutinin-esterase precursor - murine hepat...   509   e-143
sp|P31615|HEMA_CVMA5  Hemagglutinin-esterase precursor (HE) ...   509   e-143
gb|AAA46449.1|  (M23256) pot. pseudoprotein; putative [murin...   508   e-143
ref|NP_068670.1|  (NC_001846) hemagglutinin-esterase glycopr...   366   e-100
emb|CAA71819.1|  (Y10866) haemagglutinin-esterase [Breda vir...   171   2e-41
gb|AAF00614.1|AF159585_1  (AF159585) hemagglutinin-esterase ...   134   2e-30
gb|AAF19392.1|  (AF201929) hemaglutinin esterase protein [mu...   132   7e-30
dbj|BAA97995.1|  (AB035357) hemagglutinin-esterase precursor...   110   2e-23
dbj|BAA98002.1|  (AB035364) hemagglutinin-esterase precursor...   108   8e-23
dbj|BAA97996.1|  (AB035358) hemagglutinin-esterase precursor...   108   1e-22
dbj|BAA98003.1|  (AB035365) hemagglutinin-esterase precursor...   105   7e-22
dbj|BAA06093.1|  (D28968) hemagglutinin esterase [Influenzav...   105   1e-21
sp|P87691|HEMA_INCYB  Hemagglutinin-esterase precursor [Cont...   105   1e-21
pdb|1FLC|A  Chain A, X-Ray Structure Of The Haemagglutinin-E...   105   1e-21
sp|P07975|HEMA_INCJH  Hemagglutinin-esterase precursor [Cont...   105   1e-21
dbj|BAA06092.1|  (D28967) hemagglutinin esterase [Influenzav...   105   1e-21
dbj|BAA06095.1|  (D28970) hemagglutinin esterase [Influenzav...   105   1e-21
dbj|BAA97999.1|  (AB035361) hemagglutinin-esterase precursor...   105   1e-21
dbj|BAA09754.1|  (D63467) HE [Influenzavirus C]                   105   1e-21
dbj|BAA97997.1|  (AB035359) hemagglutinin-esterase precursor...   105   1e-21
dbj|BAA09760.1|  (D63473) HE [Influenzavirus C]                   105   1e-21
dbj|BAA06094.1|  (D28969) hemagglutinin esterase [Influenzav...   105   1e-21
dbj|BAA97998.1|  (AB035360) hemagglutinin-esterase precursor...   105   1e-21
pir||S07412  hemagglutinin-esterase precursor - influenza C ...   105   1e-21
sp|P07971|HEMA_INCGL  Hemagglutinin-esterase precursor [Cont...   105   1e-21
dbj|BAA88402.1|  (D78433) HE [Influenzavirus C] >gi|18656179...   104   1e-21
pir||HMIVEB  hemagglutinin precursor - influenza C virus (st...   104   1e-21
dbj|BAB84727.1|  (AB064409) hemagglutinin-esterase [Influenz...   104   1e-21
dbj|BAB84722.1|  (AB064404) hemagglutinin-esterase [Influenz...   104   2e-21
sp|Q67387|HEMA_INCNB  Hemagglutinin-esterase precursor [Cont...   104   2e-21
dbj|BAB84729.1|  (AB064411) hemagglutinin-esterase [Influenz...   104   2e-21
dbj|BAB84723.1|  (AB064405) hemagglutinin-esterase [Influenz...   104   2e-21
dbj|BAA98001.1|  (AB035363) hemagglutinin-esterase precursor...   104   2e-21
dbj|BAB84728.1|  (AB064410) hemagglutinin-esterase [Influenz...   104   2e-21
dbj|BAB84731.1|  (AB064413) hemagglutinin-esterase [Influenz...   104   2e-21
dbj|BAB84724.1|  (AB064406) hemagglutinin-esterase [Influenz...   104   2e-21
dbj|BAA09759.1|  (D63472) HE [Influenzavirus C]                   103   2e-21
dbj|BAA06096.1|  (D28971) hemagglutinin esterase [Influenzav...   103   2e-21
dbj|BAB84725.1|  (AB064407) hemagglutinin-esterase [Influenz...   103   2e-21
dbj|BAA09758.1|  (D63471) HE [Influenzavirus C]                   103   4e-21
pir||HMIVEC  hemagglutinin precursor - influenza C virus (st...   103   4e-21
dbj|BAA23376.1|  (D49361) hemagglutinin esterase [Influenza ...   103   4e-21
sp|P07969|HEMA_INCYA  Hemagglutinin-esterase precursor [Cont...   103   4e-21
sp|P17005|HEMA_INCNA  Hemagglutinin-esterase precursor [Cont...   103   4e-21
pir||HMIVEA  hemagglutinin precursor - influenza C virus (st...   102   6e-21
sp|P03465|HEMA_INCCA  Hemagglutinin-esterase precursor [Cont...   102   6e-21
sp|P07974|HEMA_INCTA  Hemagglutinin-esterase precursor [Cont...   102   7e-21
dbj|BAA09756.1|  (D63469) HE [Influenzavirus C]                   102   7e-21
dbj|BAB84717.1|  (AB064399) hemagglutinin-esterase [Influenz...   102   7e-21
dbj|BAB84721.1|  (AB064403) hemagglutinin-esterase [Influenz...   102   7e-21
dbj|BAA09757.1|  (D63470) HE [Influenzavirus C]                   102   7e-21
dbj|BAB84716.1|  (AB064398) hemagglutinin-esterase [Influenz...   102   9e-21
dbj|BAB84718.1|  (AB064400) hemagglutinin-esterase [Influenz...   102   9e-21
sp|P17003|HEMA_INCHY  Hemagglutinin-esterase precursor [Cont...   101   1e-20
sp|P17004|HEMA_INCKY  Hemagglutinin-esterase precursor [Cont...   101   1e-20
dbj|BAB84715.1|  (AB064397) hemagglutinin-esterase [Influenz...   101   2e-20
sp|P07970|HEMA_INCMI  Hemagglutinin-esterase precursor [Cont...   101   2e-20
sp|P07973|HEMA_INCEN  Hemagglutinin-esterase precursor [Cont...   100   2e-20
sp|P07966|HEMA_INCP3  Hemagglutinin-esterase precursor [Cont...   100   2e-20
dbj|BAA98000.1|  (AB035362) hemagglutinin-esterase precursor...   100   5e-20
sp|P07968|HEMA_INCP1  Hemagglutinin-esterase precursor [Cont...    99   6e-20
dbj|BAA09755.1|  (D63468) HE [Influenzavirus C]                    99   6e-20
sp|P07967|HEMA_INCP2  Hemagglutinin-esterase precursor [Cont...    99   6e-20
sp|P31964|HEML_BEV  HEMAGGLUTININ HOMOLOG >gi|279782|pir||HM...    69   7e-11
gb|AAA69004.1|  (U19935) HE [murine hepatitis virus]               53   7e-06
ref|NP_032431.1|  (NM_008405) integrin beta 2-like [Mus musc...    34   3.2  
pir||I50970  MHC class II beta chain - Melanochromis auratus...    33   7.0  
sp|O42870|SYFA_SCHPO  Phenylalanyl-tRNA synthetase alpha cha...    33   7.0  
sp|P24628|D2D1_XENLA  D(2) dopamine receptor 1 >gi|71940|pir...    32   9.2

>sp|P33468|HEMA_CVBF Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 pir||A43566 hemagglutinin-esterase precursor - bovine coronavirus  (strain F15)
          Length = 421

 Score =  885 bits (2287), Expect = 0.0
 Identities = 421/421 (100%), Positives = 421/421 (100%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAB19560.1| HE protein [bovine enteritic coronavirus BECV, strain F15, Peptide,
           421 aa]
          Length = 421

 Score =  884 bits (2284), Expect = 0.0
 Identities = 420/421 (99%), Positives = 421/421 (99%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAA73152.1| (M80842) hemagglutinin [bovine coronavirus]
          Length = 429

 Score =  879 bits (2270), Expect = 0.0
 Identities = 417/421 (99%), Positives = 420/421 (99%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGF+NPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 6   MFLLPRFVLVSCIIGSLGFENPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 65

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 66  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 125

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 126 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 185

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 186 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 245

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 246 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 305

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS
Sbjct: 306 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 365

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 366 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 425

Query: 421 L 421
           L
Sbjct: 426 L 426

>gb|AAG40590.1|AF230525_1 (AF230525) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  877 bits (2266), Expect = 0.0
 Identities = 415/421 (98%), Positives = 420/421 (99%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEG+NFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGINFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>sp|P31613|HEMA_CVBLY Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 pir||HMIHLY hemagglutinin-esterase precursor - bovine coronavirus  (strain
           LY138, virulent)
 gb|AAF25498.1|AF058942_2 (AF058942) hemagglutinin esterase [bovine coronavirus]
          Length = 424

 Score =  876 bits (2264), Expect = 0.0
 Identities = 416/421 (98%), Positives = 419/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADIN PDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINNPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAG40588.1|AF230523_1 (AF230523) hemagglutinin-esterase [bovine coronavirus]
 gb|AAG40589.1|AF230524_1 (AF230524) hemagglutinin-esterase [bovine coronavirus]
 gb|AAG40600.1| (AF239316) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  873 bits (2256), Expect = 0.0
 Identities = 414/421 (98%), Positives = 418/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LV CIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVCCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>ref|NP_150076.1| (NC_003045) hemmaglutinin-esterase [bovine coronavirus]
 gb|AAG60544.1| (AF239310) hemagglutinin-esterase [bovine coronavirus]
 gb|AAK14397.1|AF339836_1 (AF339836) hemagglutinin-esterase [bovine coronavirus]
 gb|AAK83355.1| (AF391541) hemmaglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  872 bits (2254), Expect = 0.0
 Identities = 414/421 (98%), Positives = 418/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCGSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAF25508.1|AF058943_2 (AF058943) hemagglutinin esterase [bovine coronavirus]
          Length = 424

 Score =  872 bits (2252), Expect = 0.0
 Identities = 413/421 (98%), Positives = 418/421 (99%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQ+YKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQLYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNA QSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNAMQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAA92990.1| (L38963) hemagglutinin [bovine coronavirus]
          Length = 424

 Score =  871 bits (2251), Expect = 0.0
 Identities = 414/421 (98%), Positives = 418/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGD YYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDXYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLY YGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYSYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>sp|P15776|HEMA_CVBM Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 pir||HMIHBC hemagglutinin-esterase precursor - bovine coronavirus  (strain
           Mebus)
 gb|AAB19562.1| (S50936) H [bovine coronavirus]
 gb|AAA66393.1| (M30612) hemagglutinin-esterase precursor [bovine coronavirus]
          Length = 424

 Score =  871 bits (2251), Expect = 0.0
 Identities = 415/421 (98%), Positives = 418/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLL RF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLLRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLY YGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYSYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAG40622.1| (AF239311) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  871 bits (2250), Expect = 0.0
 Identities = 413/421 (98%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCGSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+I LGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIIFLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAF25518.1|AF058944_2 (AF058944) hemagglutinin esterase [bovine coronavirus]
          Length = 424

 Score =  870 bits (2248), Expect = 0.0
 Identities = 413/421 (98%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCGSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILL VAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLSVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>sp|P24351|HEMA_CVBQ Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 pir||HMIHL9 hemagglutinin-esterase precursor - bovine coronavirus
 gb|AAB20434.2| (S69264) hemagglutinin; acetylesterase; hemagglutinin/esterase
           glycoprotein [bovine coronavirus]
 gb|AAL40399.1|AF220295_4 (AF220295) hemagglutinin-esterase envelope glycoprotein [bovine
           coronavirus]
          Length = 424

 Score =  870 bits (2248), Expect = 0.0
 Identities = 414/421 (98%), Positives = 418/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLL RF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLLRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEG+NFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGLNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLY YGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYSYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAG40593.1|AF230528_1 (AF230528) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  870 bits (2248), Expect = 0.0
 Identities = 413/421 (98%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKC TSGSND
Sbjct: 61  NPALCGSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCITSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAA92989.1|AAA92989 (AF239313) haemagglutinin [bovine coronavirus]
          Length = 424

 Score =  869 bits (2246), Expect = 0.0
 Identities = 414/421 (98%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNP NYSYMDL
Sbjct: 1   MFLLPRFALVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPPNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLY SPCFS+QGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYASPCFSRQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAA92991.1| (AF239315) hemagglutinin [bovine coronavirus]
          Length = 424

 Score =  869 bits (2246), Expect = 0.0
 Identities = 413/421 (98%), Positives = 418/421 (99%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLL RF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL
Sbjct: 1   MFLLLRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEG+NFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGLNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLY YGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYSYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAL57307.1| (AF391542) hemmaglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  869 bits (2245), Expect = 0.0
 Identities = 412/421 (97%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKIS+KAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKC TSGSND
Sbjct: 61  NPALCGSGKISAKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCITSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAG40591.1|AF230526_1 (AF230526) hemagglutinin-esterase [bovine coronavirus]
 gb|AAG40592.1|AF230527_1 (AF230527) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  868 bits (2244), Expect = 0.0
 Identities = 413/421 (98%), Positives = 417/421 (98%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLL RF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLLRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALC SGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCGSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAG40594.1| (AF239314) hemagglutinin-esterase [bovine coronavirus]
          Length = 424

 Score =  867 bits (2240), Expect = 0.0
 Identities = 412/421 (97%), Positives = 416/421 (97%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRF+LVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVV TNPRNYSYMDL
Sbjct: 1   MFLLPRFVLVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVTTNPRNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND
Sbjct: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
           F DYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 FRDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTG DFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRK FTPVQVV SRWNNARQSD
Sbjct: 241 ITTGLDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKGFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADINTPDVPICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPIILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>sp|P30215|HEMA_CVHOC Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 gb|AAA45460.1| (M76373) hemagglutinin-esterase [human coronavirus]
          Length = 424

 Score =  846 bits (2185), Expect = 0.0
 Identities = 401/421 (95%), Positives = 410/421 (97%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRFILVSCIIGSLGF NPPTNVVSH+NGDWFLFGDSRSDCNH+VN NP NYSYMDL
Sbjct: 1   MFLLPRFILVSCIIGSLGFYNPPTNVVSHVNGDWFLFGDSRSDCNHIVNINPHNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NP LCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKC  SGSND
Sbjct: 61  NPVLCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCNRSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIA +AN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAPQAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
            GDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 SGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFD NC+YLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDLNCYYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLY+SPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYNSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADIN PD+PICVYDPLP+ILLGILLGVAVIIIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINNPDLPICVYDPLPVILLGILLGVAVIIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>pir||HMIHCC hemagglutinin-esterase precursor - human coronavirus (strain OC43)
          Length = 424

 Score =  843 bits (2179), Expect = 0.0
 Identities = 398/421 (94%), Positives = 410/421 (96%)

Query: 1   MFLLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDL 60
           MFLLPRFILVSCIIGSLGF NPPTNVVSH+NGDWFLFGDSRSDCNH+VN NP NYSYMDL
Sbjct: 1   MFLLPRFILVSCIIGSLGFYNPPTNVVSHVNGDWFLFGDSRSDCNHIVNINPHNYSYMDL 60

Query: 61  NPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSND 120
           NP LCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKC  SGSND
Sbjct: 61  NPVLCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCNRSGSND 120

Query: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREAN 180
           IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQ+TALCKSGSLVLNNPAYIA +AN
Sbjct: 121 IWMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQATALCKSGSLVLNNPAYIAPQAN 180

Query: 181 FGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240
            GDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET
Sbjct: 181 SGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNSTET 240

Query: 241 ITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSD 300
           ITTGFD NC+YLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVV SRWNNARQSD
Sbjct: 241 ITTGFDLNCYYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVDSRWNNARQSD 300

Query: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVS 360
           NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLY+SPCFSQQGVFRY+NVS
Sbjct: 301 NMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYNSPCFSQQGVFRYDNVS 360

Query: 361 SVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVENGTR 420
           SVWPLYPYGRCPTAADIN PD+PICVYDPLP+ILLGILLGVA++IIVVLLLYFMV+NGTR
Sbjct: 361 SVWPLYPYGRCPTAADINIPDLPICVYDPLPVILLGILLGVAIVIIVVLLLYFMVDNGTR 420

Query: 421 L 421
           L
Sbjct: 421 L 421

>gb|AAC63044.1| (AF091734) hemagglutinin-esterase [murine hepatitis virus]
          Length = 431

 Score =  590 bits (1520), Expect = e-167
 Identities = 277/424 (65%), Positives = 337/424 (79%), Gaps = 7/424 (1%)

Query: 3   LLPRFILVSCIIG-SLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLN 61
           + PR +L+   +G + GF N P NVVSHLN DWFLFGDSRSDCNH+ N + +NY+YMD+N
Sbjct: 7   MAPRTLLLVLSLGYAFGF-NEPLNVVSHLNDDWFLFGDSRSDCNHINNLSQQNYNYMDIN 65

Query: 62  PALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDI 121
           P LC SGKIS+KAGNS+F+SFHFTDFYNYTGEG QIIFYEGVNFTPY  FKC  +G N+ 
Sbjct: 66  PELCKSGKISAKAGNSLFKSFHFTDFYNYTGEGSQIIFYEGVNFTPYVGFKCLNNGDNNR 125

Query: 122 WMQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCK----SGSLVLNNPAYIAR 177
           WM NK  FYTQ+Y+ MA YRSL+ +N+ Y YNGSA   ++CK      +L LNNP +I +
Sbjct: 126 WMGNKARFYTQLYQKMAHYRSLSVINITYTYNGSAGPVSMCKHIANGVTLTLNNPTFIGK 185

Query: 178 EANFGDYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNTKYYDDSQYYFNKDTGVIYGLNS 237
           E +  DYYY+ EA+F L GCDE+IVPLC+FNG++LS+  YYDDSQYY+N DTGV+YG NS
Sbjct: 186 EVSKPDYYYESEANFTLQGCDEFIVPLCVFNGQYLSSKLYYDDSQYYYNVDTGVLYGFNS 245

Query: 238 TETITTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
           T  IT+G D  C YL L  GNY++ISNELLLTVP+KAICL K K FTPVQVV SRW++ R
Sbjct: 246 TLNITSGLDLTCIYLALTPGNYISISNELLLTVPSKAICLRKPKAFTPVQVVDSRWHSNR 305

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYN 357
           QSDNMTA+ACQ PYCYFRN+T++Y GVYD +HGDAGFTSIL+GL+Y+  C +QQG F YN
Sbjct: 306 QSDNMTAIACQLPYCYFRNTTSDYNGVYDSHHGDAGFTSILAGLMYNVSCLAQQGAFVYN 365

Query: 358 NVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVEN 417
           NVSS WP YPYG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L+ YFM ++
Sbjct: 366 NVSSSWPQYPYGHCPTAANI-VFMAPVCMYDPLPVILLGVLLGIAVLIIVFLMFYFMTDS 424

Query: 418 GTRL 421
           G RL
Sbjct: 425 GVRL 428

>gb|AAF97737.1|AF207551_2 (AF207551) hemagglutinin-esterase glycoprotein [rat
           sialodacryoadenitis coronavirus]
          Length = 439

 Score =  532 bits (1370), Expect = e-150
 Identities = 254/425 (59%), Positives = 316/425 (73%), Gaps = 14/425 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 15  LLIGCQL-VFGF-NEPINIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           GKI++K+GNS+FRSFHFTDFYNYTGEG QIIFYEGV+F+P H FKC   G N+ WM NK 
Sbjct: 73  GKIAAKSGNSLFRSFHFTDFYNYTGEGDQIIFYEGVSFSPSHGFKCLVEGDNNKWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY  +YK MA YRSL+FV VPY Y G+A+ T++CK  +L LNNP +I++E+N+ DYYY 
Sbjct: 133 RFYALLYKKMAQYRSLSFVTVPYAYGGNAKPTSICKDKTLTLNNPTFISKESNYVDYYYV 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L GCDE+IVPLC+FNG    ++     KYY DSQ Y+N DTGV+YG NST  + 
Sbjct: 193 SEANFTLQGCDEFIVPLCVFNGHSRGSSSDPANKYYTDSQSYYNIDTGVLYGFNSTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YLVL  GNY A+S E LLT+P+KAICL K K F PVQVV SRWN+ R
Sbjct: 253 NTAQNPGLDLTCMYLVLTPGNYKAVSLEYLLTIPSKAICLRKPKRFMPVQVVDSRWNSTR 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYVG-VYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y G  +D++HGD  F  +LSGLLY+  C +QQG F Y
Sbjct: 313 QSDNMTAVACQLPYCFFRNTSADYSGDTHDVHHGDFYFRQLLSGLLYNVSCIAQQGAFLY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS+WP+Y YG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L+LYFM +
Sbjct: 373 NNVSSIWPVYGYGHCPTAANIGYM-APVCLYDPLPVILLGVLLGIAVLIIVFLILYFMAD 431

Query: 417 NGTRL 421
           +  RL
Sbjct: 432 SSVRL 436

>sp|Q83356|HEMA_CVMJH HEMAGGLUTININ-ESTERASE PRECURSOR (HE) (E3 GLYCOPROTEIN) (2B
           PROTEIN)
 pir||JQ0997 hemagglutinin-esterase precursor - murine hepatitis virus
 dbj|BAA00661.1| (D00764) hemagglutinin-esterase [murine hepatitis virus]
 gb|AAB19558.1| HE protein [murine hepatitis virus MHV, JHM, Peptide, 439 aa]
          Length = 439

 Score =  531 bits (1368), Expect = e-150
 Identities = 253/425 (59%), Positives = 316/425 (73%), Gaps = 14/425 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 15  LLIGCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           GKIS+K+GNS+FRSFHFTDFYNYTGEG QI+FYEGVNF+P H FKC   G N  WM NK 
Sbjct: 73  GKISAKSGNSLFRSFHFTDFYNYTGEGDQIVFYEGVNFSPNHGFKCLAYGDNKRWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNVPY Y G A+ T++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 133 RFYARVYEKMAQYRSLSFVNVPYAYGGKAKPTSICKHKTLTLNNPTFISKESNYVDYYYE 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L+GCDE+IVPLC+FNG    ++     KYY DSQ Y+N DTGV+YG NST  + 
Sbjct: 193 SEANFTLAGCDEFIVPLCVFNGHSKGSSSDPANKYYMDSQSYYNMDTGVLYGFNSTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL K K F PVQVV SRWN+ R
Sbjct: 253 NTAKDPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLRKPKRFMPVQVVDSRWNSTR 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y  G +D++HGD  F  +LSGLL +  C +QQG F Y
Sbjct: 313 QSDNMTAVACQLPYCFFRNTSADYSGGTHDVHHGDFHFRQLLSGLLLNVSCIAQQGAFLY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP Y YG+CPTAA+I     P+C+YDPLP++LLG+LLG+AV+IIV L+LYFM +
Sbjct: 373 NNVSSSWPAYGYGQCPTAANIGYM-APVCIYDPLPVVLLGVLLGIAVLIIVFLILYFMTD 431

Query: 417 NGTRL 421
           +G RL
Sbjct: 432 SGVRL 436

>gb|AAA46442.1| (M28348) 2b protein [murine hepatitis virus]
          Length = 439

 Score =  531 bits (1368), Expect = e-150
 Identities = 253/425 (59%), Positives = 316/425 (73%), Gaps = 14/425 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 15  LLIGCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           GKIS+K+GNS+FRSFHFTDFYNYTGEG QI+FYEGVNF+P H FKC   G N  WM NK 
Sbjct: 73  GKISAKSGNSLFRSFHFTDFYNYTGEGDQIVFYEGVNFSPNHGFKCLAYGDNKRWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNVPY Y G A+ T++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 133 AFYARVYEKMAQYRSLSFVNVPYAYGGKAKPTSICKHKTLTLNNPTFISKESNYVDYYYE 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L+GCDE+IVPLC+FNG    ++     KYY DSQ Y+N DTGV+YGLN T  + 
Sbjct: 193 SEANFTLAGCDEFIVPLCVFNGHSKGSSSDPANKYYMDSQSYYNMDTGVLYGLNCTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL K K F PVQVV SRWN+ R
Sbjct: 253 NTAKDPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLRKPKRFMPVQVVDSRWNSTR 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y  G +D++HGD  F  +LSGLL +  C +QQG F Y
Sbjct: 313 QSDNMTAVACQLPYCFFRNTSADYSGGTHDVHHGDFHFRQLLSGLLLNVSCIAQQGAFLY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP Y YG+CPTAA+I     P+C+YDPLP++LLG+LLG+AV+IIV L+LYFM +
Sbjct: 373 NNVSSSWPAYGYGQCPTAANIGYM-APVCIYDPLPVVLLGVLLGIAVLIIVFLILYFMTD 431

Query: 417 NGTRL 421
           +G RL
Sbjct: 432 SGVRL 436

>dbj|BAA23718.1| (AB008939) hemagglutinin-esterase glycoprotein [murine hepatitis
           virus]
          Length = 439

 Score =  526 bits (1356), Expect = e-148
 Identities = 250/425 (58%), Positives = 313/425 (72%), Gaps = 14/425 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 15  LLIGCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           G+IS+K+GNS+FRSFHF DFYNY+GEG Q+IFYEGVNF+P H FKC   G N  WM NK 
Sbjct: 73  GRISAKSGNSLFRSFHFIDFYNYSGEGDQVIFYEGVNFSPSHGFKCLAYGDNKRWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNV Y Y G+A+ T++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 133 RFYARVYEKMAQYRSLSFVNVSYAYGGNAKPTSICKDKTLTLNNPTFISKESNYVDYYYE 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L GCDE+IVPLC+FNG    ++     KYY DSQ Y+N DTGV+YG NST  + 
Sbjct: 193 SEANFTLQGCDEFIVPLCVFNGHSKGSSSDPANKYYTDSQSYYNMDTGVLYGFNSTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL K K F PVQVV SRWN+ R
Sbjct: 253 NTVQNPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLRKPKSFMPVQVVDSRWNSTR 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y  G +D++HGD  F  +LSGLLY+  C +QQG F Y
Sbjct: 313 QSDNMTAVACQLPYCFFRNTSADYSGGTHDVHHGDFHFRQLLSGLLYNVSCIAQQGAFVY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP Y YG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L+ YFM +
Sbjct: 373 NNVSSSWPAYGYGHCPTAANIGYM-APVCIYDPLPVILLGVLLGIAVLIIVFLMFYFMTD 431

Query: 417 NGTRL 421
           +G RL
Sbjct: 432 SGVRL 436

>emb|CAA06776.1| (AJ005960) hemagglutinin-esterase [Puffinosis virus]
          Length = 439

 Score =  518 bits (1335), Expect = e-146
 Identities = 251/425 (59%), Positives = 310/425 (72%), Gaps = 14/425 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C + +LGF N P NVVSHL+ DWFLFGDSRSDC++V N     + ++DL   LC S
Sbjct: 15  LLIGCQL-ALGF-NEPLNVVSHLSDDWFLFGDSRSDCSYVENNGHPAFDWLDLPQELCHS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           GKIS+K+GNS+F+SFHFTD+YNYTGEG Q+IFYEGVNF+P H FKC   G N  WM NK 
Sbjct: 73  GKISAKSGNSLFKSFHFTDWYNYTGEGDQVIFYEGVNFSPSHGFKCLAEGDNKRWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY  VYK MA YRSL+FVNV Y Y G A+ TA+CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 133 RFYALVYKKMAYYRSLSFVNVSYSYGGKAKPTAICKDNTLTLNNPTFISKESNYVDYYYE 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            +A+F L GCDE+IVPLC+FNG    ++     KYY DSQ Y+N DTGV YG NST  + 
Sbjct: 193 SDANFTLEGCDEFIVPLCVFNGHSRGSSSDPANKYYMDSQMYYNMDTGVFYGFNSTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C Y  L  GNY A+S E LLT+P+KAICL K K F PVQVV SRWNNA+
Sbjct: 253 NTAQNPGLDLTCIYYALTPGNYKAVSLEYLLTIPSKAICLRKPKRFMPVQVVDSRWNNAK 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYVG-VYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
            SDNMTAVACQ PYC FRN+++ Y G  +D++HG   F  +LSGLLY+  C +QQG F Y
Sbjct: 313 HSDNMTAVACQTPYCLFRNTSSGYNGSTHDVHHGGFHFRKLLSGLLYNVSCIAQQGAFFY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP+  YG+CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV LL YFM +
Sbjct: 373 NNVSSQWPVLGYGQCPTAANIEF-IAPVCLYDPLPVILLGVLLGIAVLIIVFLLFYFMTD 431

Query: 417 NGTRL 421
           +G RL
Sbjct: 432 SGVRL 436

>gb|AAA46460.1| (M64316) hemagglutinin-esterase [murine hepatitis virus]
          Length = 434

 Score =  513 bits (1322), Expect = e-144
 Identities = 244/422 (57%), Positives = 309/422 (72%), Gaps = 14/422 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 15  LLIGCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 72

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           G+I +K+GNS+FRSFHF DFYNY+GEG Q+IFYEGVNF+P H FKC   G N  WM NK 
Sbjct: 73  GRIYAKSGNSLFRSFHFIDFYNYSGEGDQVIFYEGVNFSPSHGFKCLAYGDNKRWMGNKA 132

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNV Y Y G+A+ T++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 133 RFYARVYEKMAQYRSLSFVNVSYAYGGNAKPTSICKDKTLTLNNPTFISKESNYVDYYYE 192

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L GCDE+IV LC+ NG   S++     KYY D+Q Y+N DTGV+YG NST  + 
Sbjct: 193 SEANFTLQGCDEFIVTLCVSNGHSKSSSSDPANKYYTDAQSYYNMDTGVLYGFNSTLDVG 252

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL K K F PVQVV SRWN+ R
Sbjct: 253 NTVQNPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLRKPKSFMPVQVVDSRWNSTR 312

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y  G +D++HGD  F  +LSGLLY+  C +QQG F Y
Sbjct: 313 QSDNMTAVACQLPYCFFRNTSADYSGGTHDVHHGDFHFRQLLSGLLYNVSCIAQQGAFVY 372

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP Y YG CPTAA+I     P+C+Y+PLP+ILLG+LLG+AV+IIV L+ YFM +
Sbjct: 373 NNVSSSWPAYGYGHCPTAANIGYM-APVCIYEPLPVILLGVLLGIAVLIIVFLMFYFMTD 431

Query: 417 NG 418
           +G
Sbjct: 432 SG 433

>sp|P31614|HEMA_CVMS Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
 pir||HMIHMS hemagglutinin-esterase precursor - murine hepatitis virus  (strain
           MHV-S)
          Length = 430

 Score =  513 bits (1322), Expect = e-144
 Identities = 244/422 (57%), Positives = 309/422 (72%), Gaps = 14/422 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 12  LLIGCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 69

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           G+I +K+GNS+FRSFHF DFYNY+GEG Q+IFYEGVNF+P H FKC   G N  WM NK 
Sbjct: 70  GRIYAKSGNSLFRSFHFIDFYNYSGEGDQVIFYEGVNFSPSHGFKCLAYGDNKRWMGNKA 129

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNV Y Y G+A+ T++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 130 RFYARVYEKMAQYRSLSFVNVSYAYGGNAKPTSICKDKTLTLNNPTFISKESNYVDYYYE 189

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L GCDE+IV LC+ NG   S++     KYY D+Q Y+N DTGV+YG NST  + 
Sbjct: 190 SEANFTLQGCDEFIVTLCVSNGHSKSSSSDPANKYYTDAQSYYNMDTGVLYGFNSTLDVG 249

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL K K F PVQVV SRWN+ R
Sbjct: 250 NTVQNPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLRKPKSFMPVQVVDSRWNSTR 309

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTAVACQ PYC+FRN++ +Y  G +D++HGD  F  +LSGLLY+  C +QQG F Y
Sbjct: 310 QSDNMTAVACQLPYCFFRNTSADYSGGTHDVHHGDFHFRQLLSGLLYNVSCIAQQGAFVY 369

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYFMVE 416
           NNVSS WP Y YG CPTAA+I     P+C+Y+PLP+ILLG+LLG+AV+IIV L+ YFM +
Sbjct: 370 NNVSSSWPAYGYGHCPTAANIGYM-APVCIYEPLPVILLGVLLGIAVLIIVFLMFYFMTD 428

Query: 417 NG 418
           +G
Sbjct: 429 SG 430

>pir||HMIHMH hemagglutinin-esterase precursor - murine hepatitis virus  (strain
           A59)
          Length = 427

 Score =  509 bits (1312), Expect = e-143
 Identities = 246/422 (58%), Positives = 304/422 (71%), Gaps = 13/422 (3%)

Query: 3   LLPRFILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNP 62
           + PR +L+       GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P
Sbjct: 5   MAPRTLLLLICQLVFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDP 63

Query: 63  ALCDSGKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIW 122
            LC+SGKIS+K+GNS+FRSFHFTDFYNYTGEG QI+FYEGVNF+P H FKC   G N  W
Sbjct: 64  KLCNSGKISAKSGNSLFRSFHFTDFYNYTGEGDQIVFYEGVNFSPSHGFKCLAHGDNKRW 123

Query: 123 MQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFG 182
           M NK  FY +VY+ MA YRSL+FVNV Y Y G+A+  ++CK  +L LNNP +I++E+N+ 
Sbjct: 124 MGNKARFYARVYEKMAQYRSLSFVNVSYAYGGNAKPASICKDNTLTLNNPTFISKESNYV 183

Query: 183 DYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNS 237
           DYYY+ EA+F L GCDE+IVPLC FNG    ++     KYY DSQ Y+N D GV+YG NS
Sbjct: 184 DYYYESEANFTLEGCDEFIVPLCGFNGHSKGSSSDAANKYYTDSQSYYNMDIGVLYGFNS 243

Query: 238 TETI-----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSR 292
           T  +       G D  C YL L  GNY A+S E LL++P+KAICL+K K F PVQVV SR
Sbjct: 244 TLDVGNTAKDPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLHKTKRFMPVQVVDSR 303

Query: 293 WNNARQSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQ 351
           W++ RQSDNMTA ACQ PYC+FRN++ NY  G +D +HGD  F  +LSGLLY+  C +QQ
Sbjct: 304 WSSIRQSDNMTAAACQLPYCFFRNTSANYSGGTHDAHHGDFHFRQLLSGLLYNVSCIAQQ 363

Query: 352 GVFRYNNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLL 411
           G F YNNVSS WP Y YG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L +
Sbjct: 364 GAFLYNNVSSSWPAYGYGHCPTAANIGYM-APVCIYDPLPVILLGVLLGIAVLIIVFLNV 422

Query: 412 YF 413
            F
Sbjct: 423 LF 424

>sp|P31615|HEMA_CVMA5 Hemagglutinin-esterase precursor (HE) (E3 glycoprotein)
          Length = 428

 Score =  509 bits (1310), Expect = e-143
 Identities = 245/417 (58%), Positives = 303/417 (71%), Gaps = 14/417 (3%)

Query: 8   ILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDS 67
           +L+ C +   GF N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+S
Sbjct: 12  LLIXCQL-VFGF-NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNS 69

Query: 68  GKISSKAGNSIFRSFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKG 127
           GKIS+K+GNS+FRSFHFTDFYNYTGEG QI+FYEGVNF+P H FKC   G N  WM NK 
Sbjct: 70  GKISAKSGNSLFRSFHFTDFYNYTGEGDQIVFYEGVNFSPSHGFKCLAHGDNKRWMGNKA 129

Query: 128 LFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYK 187
            FY +VY+ MA YRSL+FVNV Y Y G+A+  ++CK  +L LNNP +I++E+N+ DYYY+
Sbjct: 130 RFYARVYEKMAQYRSLSFVNVSYAYGGNAKPASICKDNTLTLNNPTFISKESNYVDYYYE 189

Query: 188 VEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI- 241
            EA+F L GCDE+IVPLC FNG    ++     KYY DSQ Y+N D GV+YG NST  + 
Sbjct: 190 SEANFTLEGCDEFIVPLCGFNGHSKGSSSDAANKYYTDSQSYYNMDIGVLYGFNSTLDVG 249

Query: 242 ----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNAR 297
                 G D  C YL L  GNY A+S E LL++P+KAICL+K K F PVQVV SRW++ R
Sbjct: 250 NTAKDPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLHKTKRFMPVQVVDSRWSSIR 309

Query: 298 QSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRY 356
           QSDNMTA ACQ PYC+FRN++ NY  G +D +HGD  F  +LSGLLY+  C +QQG F Y
Sbjct: 310 QSDNMTAAACQLPYCFFRNTSANYSGGTHDAHHGDFHFRQLLSGLLYNVSCIAQQGAFLY 369

Query: 357 NNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYF 413
           NNVSS WP Y YG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L + F
Sbjct: 370 NNVSSSWPAYGYGHCPTAANIGYM-APVCIYDPLPVILLGVLLGIAVLIIVFLNVLF 425

>gb|AAA46449.1| (M23256) pot. pseudoprotein; putative [murine hepatitis virus]
          Length = 413

 Score =  508 bits (1307), Expect = e-143
 Identities = 241/404 (59%), Positives = 296/404 (72%), Gaps = 12/404 (2%)

Query: 21  NPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFR 80
           N P N+VSHLN DWFLFGDSRSDC +V N       ++DL+P LC+SGKIS+K+GNS+FR
Sbjct: 8   NEPLNIVSHLNDDWFLFGDSRSDCTYVENNGHPKLDWLDLDPKLCNSGKISAKSGNSLFR 67

Query: 81  SFHFTDFYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVY 140
           SFHFTDFYNYTGEG QI+FYEGVNF+P H FKC   G N  WM NK  FY +VY+ MA Y
Sbjct: 68  SFHFTDFYNYTGEGDQIVFYEGVNFSPSHGFKCLAHGDNKRWMGNKARFYARVYEKMAQY 127

Query: 141 RSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYKVEADFYLSGCDEY 200
           RSL+FVNV Y Y G+A+  ++CK  +L LNNP +I++E+N+ DYYY+ EA+F L GCDE+
Sbjct: 128 RSLSFVNVSYAYGGNAKPASICKDNTLTLNNPTFISKESNYVDYYYESEANFTLEGCDEF 187

Query: 201 IVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNSTETI-----TTGFDFNCH 250
           IVPLC FNG    ++     KYY DSQ Y+N D GV+YG NST  +       G D  C 
Sbjct: 188 IVPLCGFNGHSKGSSSDAANKYYTDSQSYYNMDIGVLYGFNSTLDVGNTAKDPGLDLTCR 247

Query: 251 YLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVACQPP 310
           YL L  GNY A+S E LL++P+KAICL+K K F PVQVV SRW++ RQSDNMTA ACQ P
Sbjct: 248 YLALTPGNYKAVSLEYLLSLPSKAICLHKTKRFMPVQVVDSRWSSIRQSDNMTAAACQLP 307

Query: 311 YCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYPYG 369
           YC+FRN++ NY  G +D +HGD  F  +LSGLLY+  C +QQG F YNNVSS WP Y YG
Sbjct: 308 YCFFRNTSANYSGGTHDAHHGDFHFRQLLSGLLYNVSCIAQQGAFLYNNVSSSWPAYGYG 367

Query: 370 RCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYF 413
            CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L + F
Sbjct: 368 HCPTAANIGYM-APVCIYDPLPVILLGVLLGIAVLIIVFLNVLF 410

>ref|NP_068670.1| (NC_001846) hemagglutinin-esterase glycoprotein [murine hepatitis
           virus]
          Length = 312

 Score =  366 bits (939), Expect = e-100
 Identities = 177/310 (57%), Positives = 223/310 (71%), Gaps = 12/310 (3%)

Query: 123 MQNKGLFYTQVYKNMAVYRSLTFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFG 182
           M NK  FY +VY+ MA YRSL+FVNV Y Y G+A+  ++CK  +L LNNP +I++E+N+ 
Sbjct: 1   MGNKARFYARVYEKMAQYRSLSFVNVSYAYGGNAKPASICKDNTLTLNNPTFISKESNYV 60

Query: 183 DYYYKVEADFYLSGCDEYIVPLCIFNGKFLSNT-----KYYDDSQYYFNKDTGVIYGLNS 237
           DYYY+ EA+F L GCDE+IVPLC FNG    ++     KYY DSQ Y+N D GV+YG NS
Sbjct: 61  DYYYESEANFTLEGCDEFIVPLCGFNGHSKGSSSDAANKYYTDSQSYYNMDIGVLYGFNS 120

Query: 238 TETI-----TTGFDFNCHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSR 292
           T  +       G D  C YL L  GNY A+S E LL++P+KAICL+K K F PVQVV SR
Sbjct: 121 TLDVGNTAKDPGLDLTCRYLALTPGNYKAVSLEYLLSLPSKAICLHKTKRFMPVQVVDSR 180

Query: 293 WNNARQSDNMTAVACQPPYCYFRNSTTNYV-GVYDINHGDAGFTSILSGLLYDSPCFSQQ 351
           W++ RQSDNMTA ACQ PYC+FRN++ NY  G +D +HGD  F  +LSGLLY+  C +QQ
Sbjct: 181 WSSIRQSDNMTAAACQLPYCFFRNTSANYSGGTHDAHHGDFHFRQLLSGLLYNVSCIAQQ 240

Query: 352 GVFRYNNVSSVWPLYPYGRCPTAADINTPDVPICVYDPLPLILLGILLGVAVIIIVVLLL 411
           G F YNNVSS WP Y YG CPTAA+I     P+C+YDPLP+ILLG+LLG+AV+IIV L+ 
Sbjct: 241 GAFLYNNVSSSWPAYGYGHCPTAANIGYM-APVCIYDPLPVILLGVLLGIAVLIIVFLMF 299

Query: 412 YFMVENGTRL 421
           YFM ++G RL
Sbjct: 300 YFMTDSGVRL 309

>emb|CAA71819.1| (Y10866) haemagglutinin-esterase [Breda virus]
 gb|AAD03842.1| (AF076621) hemagglutinin-esterase protein [Breda virus]
          Length = 416

 Score =  171 bits (432), Expect = 2e-41
 Identities = 131/409 (32%), Positives = 187/409 (45%), Gaps = 43/409 (10%)

Query: 29  HLNGDWFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF- 87
           H+  DW  FGDSRSDC     TNP++   +D+   LC   K SSK+ +S+F S H+ +  
Sbjct: 26  HITFDWCGFGDSRSDC-----TNPQSPMSLDIPQQLCP--KFSSKSSSSMFLSLHWNNHS 78

Query: 88  ----YNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSL 143
               Y+Y   G + +FYEGVNF+P   + C   G  D W++ K  FYT++Y+     R +
Sbjct: 79  SFVSYDYFNCGVEKVFYEGVNFSPRKQYSCWDEGV-DGWIELKTRFYTKLYQMATTSRCI 137

Query: 144 TFVNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYKVEADFYLSG------C 197
             + +    +       +C++   + +NP    R A   D        F L G      C
Sbjct: 138 KLIQLQAPSSLPTLQAGVCRTNKQLPDNP----RLALLSDTV-PTSVQFVLPGSSGTTIC 192

Query: 198 DEYIVPLCIFN-GKFLSN-------TKYYDDSQYYFNKDTGVIYGLNSTETITTGFDFNC 249
            +++VP C  N G F +          Y  DS YY   D     G  STE+     D+ C
Sbjct: 193 TKHLVPFCYLNHGCFTTGGSCLPFGVSYVSDSFYYGYYDATPQIG--STES----HDYVC 246

Query: 250 HYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVACQP 309
            YL +  G Y A +    L  PTK+ C++      PVQ V S W+    SD+    AC+ 
Sbjct: 247 DYLFMEPGTYNASTVGKFLVYPTKSYCMDTMNITVPVQAVQSIWSEQYASDDAIGQACKA 306

Query: 310 PYCYFRNSTTNY--VGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
           PYC F N TT Y      D NHGD     ++ GLL +S C S QG       S+     P
Sbjct: 307 PYCIFYNKTTPYTVTNGSDANHGDDEVRMMMQGLLRNSSCISPQGSTPLALYSTEMIYEP 366

Query: 368 -YGRCPTAADI--NTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYF 413
            YG CP    +   + +  I V      +   +LL V VI+I V++ +F
Sbjct: 367 NYGSCPQFYKLFDTSGNENIDVISSSYFVATWVLLVVVVILIFVIISFF 415

>gb|AAF00614.1|AF159585_1 (AF159585) hemagglutinin-esterase [Human torovirus]
          Length = 416

 Score =  134 bits (336), Expect = 2e-30
 Identities = 113/406 (27%), Positives = 179/406 (43%), Gaps = 51/406 (12%)

Query: 36  LFGDSRSDCNHVVNT----NPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTD----- 86
           LFGDSRSDC  V +     NP+N+         C +   S K+ +S+F S H+ +     
Sbjct: 33  LFGDSRSDCTKVQSPMSLDNPQNF---------CPN--FSLKSSSSMFFSIHYNNHSSLV 81

Query: 87  -FYNYTGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTF 145
            F N+    +++ +Y GVN +P + + C   G  D +M+ K  F  ++ +   + R +  
Sbjct: 82  LFDNFNCRIEKV-YYNGVNLSPRNQYSCYDEGV-DSYMELKTSFNIKLNQMATILRCIKL 139

Query: 146 VNVPYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDYYYKVEADFYLSG---CDEYIV 202
           + +    + +     +C++   + NNP +         +   V  D  LSG   C +Y+V
Sbjct: 140 IQLKARSSFTTLQDVVCRTNKYLPNNPTFALLSDTVPTWVQFVLPD--LSGKTICIKYLV 197

Query: 203 PLCIFN-GKFLSNTK-------YYDDSQYYFNKDTGVIYGLNSTETITTGFDFNCHYLVL 254
           P C  N G F + +        Y  DS  Y   D     GL  +       D  C YL +
Sbjct: 198 PFCHLNHGCFTAGSSCPPFGVSYVSDSFNYGFNDATPYIGLAESH------DNVCDYLFV 251

Query: 255 PSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVACQPPYCYF 314
            +G + A      L  PTK+ C N      PVQ + S W+   +SD+  A AC+PP+C +
Sbjct: 252 EAGTHNASIVGNFLFYPTKSYCFNTMNFTVPVQAIQSIWSEGNESDDAIAEACKPPFCIY 311

Query: 315 RNSTTNYVGVYDIN--HGDAGFTSILSGLLYDSPCFSQQG---VFRYNNVSSVWPLYPYG 369
            + TT Y      N  H D     ++ GLLY+S C S QG   +  Y+      P+  YG
Sbjct: 312 YSKTTPYTVTNGSNADHRDDEVRMMVRGLLYNSSCISAQGSTPLALYSTAMLYAPI--YG 369

Query: 370 RCPTAADI--NTPDVPICVYDPLPLILLGILLGVAVIIIVVLLLYF 413
            CP    +   +    + V      +   +LL V VI+I V++ +F
Sbjct: 370 SCPQYVKLFDTSGSESVDVISSSYFVATWVLLVVVVILIFVIISFF 415

>gb|AAF19392.1| (AF201929) hemaglutinin esterase protein [murine hepatitis virus
          strain 2]
 gb|AAF68922.1|AF207902_4 (AF207902) hemagglutinin esterase protein [murine hepatitis virus
          strain ML-11]
          Length = 97

 Score =  132 bits (332), Expect = 7e-30
 Identities = 63/96 (65%), Positives = 74/96 (76%), Gaps = 4/96 (4%)

Query: 1  MFLLPR--FILVSCIIGSLGFDNPPTNVVSHLNGDWFLFGDSRSDCNHVVNTNPRNYSYM 58
          M + PR   +L+ C +   GF N P N VSH N DWFLFGDSRSDCNH+ + + +NY YM
Sbjct: 3  MAMAPRTLLLLIGCQL-VFGF-NEPLNTVSHSNDDWFLFGDSRSDCNHISSLSQQNYKYM 60

Query: 59 DLNPALCDSGKISSKAGNSIFRSFHFTDFYNYTGEG 94
          D+NP LC SGKISSKAGNS+FRSFHFTDFYNY+GEG
Sbjct: 61 DINPELCKSGKISSKAGNSLFRSFHFTDFYNYSGEG 96

>dbj|BAA97995.1| (AB035357) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 645

 Score =  110 bits (276), Expect = 2e-23
 Identities = 103/374 (27%), Positives = 163/374 (43%), Gaps = 36/374 (9%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 55  WIGFGDSRTDKSN--SAFPRS---ADVSEKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 107

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNVPY 150
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 108 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 163

Query: 151 VYNGSAQSTALCKS-GSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDEYI 201
                  +  + K+  +  L NPA   +E N            ++ +   F    C  ++
Sbjct: 164 KTIPLQATVGVAKNCNNSFLKNPALYTQEVNPSKEKCGKENLAFFTLPTQFGTYECKLHL 223

Query: 202 VPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHYLV 253
           V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  L 
Sbjct: 224 VASCYFIYDSKEVYNKRGCDNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDMLQ 283

Query: 254 LPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPPYC 312
           L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD+    AC   P C
Sbjct: 284 LKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSVWGKGRESDHAVDQACLSTPGC 342

Query: 313 YFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--YGR 370
                   Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +GR
Sbjct: 343 MLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLPPKFGR 402

Query: 371 CPTAA-DINTPDVP 383
           CP AA + + P +P
Sbjct: 403 CPLAAKEESIPKIP 416

>dbj|BAA98002.1| (AB035364) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 650

 Score =  108 bits (271), Expect = 8e-23
 Identities = 102/376 (27%), Positives = 160/376 (42%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D      TN       D++    D  K  S +G S+  S         Y Y
Sbjct: 60  WIGFGDSRTD-----KTNSAFPRSADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 112

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C +    DI +     F   +Y+  +    ++ VN   
Sbjct: 113 QGCGKHKVFYEGVNWSPHAAIDCYSKNWTDIKLN----FQKNIYELASKSHCMSLVNALD 168

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                + +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 169 KTIPLHATAGTAKNCNNS--FLKNPALYTQEVKPSEEKCGKENLAFFTLPTQFGTYECKL 226

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  
Sbjct: 227 HLVASCYFIYDSKEVYNKRGCDNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDM 286

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           + L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 287 IQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSVWGKGRKSDYAVDQACLSTP 345

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 346 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCVSQSGWVNETSPFAEEYLLPPKF 405

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 406 GRCPLAAKEESIPKIP 421

>dbj|BAA97996.1| (AB035358) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 645

 Score =  108 bits (270), Expect = 1e-22
 Identities = 103/376 (27%), Positives = 162/376 (42%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 55  WIGFGDSRTDKSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 107

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 108 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 163

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 164 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKL 221

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  
Sbjct: 222 HLVASCYFIYDSKEVYNKRGCDNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDM 281

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 282 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 340

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 341 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 400

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 401 GRCPLAAKEESIPKIP 416

>dbj|BAA98003.1| (AB035365) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 648

 Score =  105 bits (263), Expect = 7e-22
 Identities = 101/376 (26%), Positives = 159/376 (41%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D      TN       D++    D  K  S +G S+  S         Y Y
Sbjct: 58  WIGFGDSRTD-----KTNSAFPRSADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 110

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++ + A  C +    DI +     F   +Y+  +    ++ VN   
Sbjct: 111 QGCGKHKVFYEGVNWSAHAAIDCYSKNWTDIKLN----FQKNIYELASKSHCMSLVNALD 166

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                + +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 167 KTIPLHATAGTAKNCNNS--FLKNPALYTQEVKPSEEKCGKENLAFFTLPTQFGTYECKL 224

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  
Sbjct: 225 HLVASCYFIYDSKEVYNKRGCDNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDM 284

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           + L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 285 IQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRKSDYAVDQACLSTP 343

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 344 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCVSQSGWVNETSPFAEEYLLPPKF 403

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 404 GRCPLAAKEESIPKIP 419

>dbj|BAA06093.1| (D28968) hemagglutinin esterase [Influenzavirus C]
          Length = 649

 Score =  105 bits (261), Expect = 1e-21
 Identities = 105/379 (27%), Positives = 165/379 (42%), Gaps = 46/379 (12%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 59  WIGFGDSRTDQSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 111

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVN--- 147
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 112 QGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLN----FQKSIYELASQSHCMSLVNALD 167

Query: 148 --VPY-VYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSG 196
             +P  V  G A++   C +    L NPA   +E    +         ++ +   F    
Sbjct: 168 KTIPLQVTKGVAKN---CNNS--FLKNPALYTQEVKPLEQICGEENLAFFTLPTQFGTYE 222

Query: 197 CDEYIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FN 248
           C  ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         
Sbjct: 223 CKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQ 282

Query: 249 CHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC- 307
           C  L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC 
Sbjct: 283 CDMLQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDTAVDQACL 341

Query: 308 QPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
             P C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P
Sbjct: 342 STPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLP 401

Query: 368 --YGRCPTAA-DINTPDVP 383
             +GRCP AA + + P +P
Sbjct: 402 PKFGRCPLAAKEESIPKIP 420

>sp|P87691|HEMA_INCYB Hemagglutinin-esterase precursor [Contains: Hemagglutinin chain 1
           (HE1); Hemagglutinin chain 2 (HE2)]
 dbj|BAA09781.1| (D63503) hemagglutinin-esterase (HE) [Influenzavirus C]
          Length = 648

 Score =  105 bits (261), Expect = 1e-21
 Identities = 105/379 (27%), Positives = 165/379 (42%), Gaps = 46/379 (12%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 58  WIGFGDSRTDQSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 110

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVN--- 147
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 111 QGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLN----FQKSIYELASQSHCMSLVNALD 166

Query: 148 --VPY-VYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSG 196
             +P  V  G A++   C +    L NPA   +E    +         ++ +   F    
Sbjct: 167 KTIPLQVTKGVAKN---CNNS--FLKNPALYTQEVKPLEQICGEENLAFFTLPTQFGTYE 221

Query: 197 CDEYIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FN 248
           C  ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         
Sbjct: 222 CKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQ 281

Query: 249 CHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVACQ 308
           C  L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC 
Sbjct: 282 CDMLQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDTAVDQACS 340

Query: 309 P-PYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
             P C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P
Sbjct: 341 STPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLP 400

Query: 368 --YGRCPTAA-DINTPDVP 383
             +GRCP AA + + P +P
Sbjct: 401 PKFGRCPLAAKEESIPKIP 419

>pdb|1FLC|A Chain A, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
           Glycoprotein Of Influenza C Virus
 pdb|1FLC|E Chain E, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
           Glycoprotein Of Influenza C Virus
 pdb|1FLC|C Chain C, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
           Glycoprotein Of Influenza C Virus
          Length = 432

 Score =  105 bits (261), Expect = 1e-21
 Identities = 102/376 (27%), Positives = 161/376 (42%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  +  S  G S+  S         Y Y
Sbjct: 51  WIGFGDSRTDKSN--SAFPRS---ADVSAKTADKFRFLS--GGSLMLSMFGPPGKVDYLY 103

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 104 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 159

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 160 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKL 217

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  
Sbjct: 218 HLVASCYFIYDSKEVYNKRGCDNYFQVIYDSFGKVVGGLDNRVSPYTGNSGDTPTMQCDM 277

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 278 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 336

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 337 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 396

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 397 GRCPLAAKEESIPKIP 412

>sp|P07975|HEMA_INCJH Hemagglutinin-esterase precursor [Contains: Hemagglutinin chain 1
           (HE1); Hemagglutinin chain 2 (HE2)]
 gb|AAA43788.1| (M17868) hemagglutinin esterase precursor [Influenzavirus C]
          Length = 655

 Score =  105 bits (261), Expect = 1e-21
 Identities = 102/376 (27%), Positives = 161/376 (42%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  +  S  G S+  S         Y Y
Sbjct: 65  WIGFGDSRTDKSN--SAFPRS---ADVSAKTADKFRFLS--GGSLMLSMFGPPGKVDYLY 117

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 118 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 173

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 174 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKL 231

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +  D+  Q  ++    V+ GL++  +  TG         C  
Sbjct: 232 HLVASCYFIYDSKEVYNKRGCDNYFQVIYDSFGKVVGGLDNRVSPYTGNSGDTPTMQCDM 291

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 292 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 350

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 351 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 410

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 411 GRCPLAAKEESIPKIP 426

>dbj|BAA06092.1| (D28967) hemagglutinin esterase [Influenzavirus C]
          Length = 646

 Score =  105 bits (261), Expect = 1e-21
 Identities = 105/379 (27%), Positives = 165/379 (42%), Gaps = 46/379 (12%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 56  WIGFGDSRTDQSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 108

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVN--- 147
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 109 QGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLN----FQKSIYELASQSHCMSLVNALD 164

Query: 148 --VPY-VYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSG 196
             +P  V  G A++   C +    L NPA   +E    +         ++ +   F    
Sbjct: 165 KTIPLQVTKGVAKN---CNNS--FLKNPALYTQEVKPLEQICGEENLAFFTLPTQFGTYE 219

Query: 197 CDEYIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FN 248
           C  ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         
Sbjct: 220 CKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQ 279

Query: 249 CHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC- 307
           C  L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC 
Sbjct: 280 CDMLQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDTAVDQACL 338

Query: 308 QPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
             P C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P
Sbjct: 339 STPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLP 398

Query: 368 --YGRCPTAA-DINTPDVP 383
             +GRCP AA + + P +P
Sbjct: 399 PKFGRCPLAAKEESIPKIP 417

>dbj|BAA06095.1| (D28970) hemagglutinin esterase [Influenzavirus C]
          Length = 647

 Score =  105 bits (261), Expect = 1e-21
 Identities = 100/376 (26%), Positives = 156/376 (40%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++       + S    N       K  S +G S+  S         Y Y
Sbjct: 57  WIGFGDSRTDKSNSAFPRSADVSAKTAN-------KFRSLSGGSLMLSMFGPPGKVDYLY 109

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 110 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 165

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 166 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGEENLAFFTLPTQFGTYECKL 223

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         C  
Sbjct: 224 HLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDM 283

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 284 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 342

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 343 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 402

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 403 GRCPLAAKEESIPKIP 418

>dbj|BAA97999.1| (AB035361) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 649

 Score =  105 bits (261), Expect = 1e-21
 Identities = 100/376 (26%), Positives = 156/376 (40%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++       + S    N       K  S +G S+  S         Y Y
Sbjct: 59  WIGFGDSRTDKSNSAFPRSADVSAKTAN-------KFRSLSGGSLMLSMFGPPGKVDYLY 111

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 112 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 167

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 168 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGEENLAFFTLPTQFGTYECKL 225

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         C  
Sbjct: 226 HLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQCDM 285

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 286 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 344

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 345 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 404


Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 405 GRCPLAAKEESIPKIP 420

>dbj|BAA09754.1| (D63467) HE [Influenzavirus C]
          Length = 609

 Score =  105 bits (261), Expect = 1e-21
 Identities = 105/379 (27%), Positives = 164/379 (42%), Gaps = 46/379 (12%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 19  WIGFGDSRTDKSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 71

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVN--- 147
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 72  QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 127

Query: 148 --VPY-VYNGSAQSTALCKSGSLVLNNPAYIAREANFGD--------YYYKVEADFYLSG 196
             +P  V  G A++   C      L NPA   +E    +         ++ +   F    
Sbjct: 128 KTIPLQVTKGVAKN---CNDS--FLKNPALYTQEVKPSEDKCGEENLAFFTLPTQFGTYK 182

Query: 197 CDEYIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FN 248
           C  ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         
Sbjct: 183 CRMHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQ 242

Query: 249 CHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC- 307
           C  L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC 
Sbjct: 243 CDMLQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSVWGKGRKSDYAVDQACL 301

Query: 308 QPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
             P C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P
Sbjct: 302 STPGCMLVQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLP 361

Query: 368 --YGRCPTAA-DINTPDVP 383
             +GRCP AA + + P +P
Sbjct: 362 PKFGRCPLAAKEESIPKIP 380

>dbj|BAA97997.1| (AB035359) hemagglutinin-esterase precursor [Influenzavirus C]
          Length = 641

 Score =  105 bits (261), Expect = 1e-21
 Identities = 101/376 (26%), Positives = 161/376 (41%), Gaps = 40/376 (10%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 51  WIGFGDSRTDKSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 103

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVNV-- 148
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 104 QGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLN----FQKNIYELASQSHCMSLVNALD 159

Query: 149 -PYVYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSGCDE 199
                  +A +   C +    L NPA   +E    +         ++ +   F    C  
Sbjct: 160 KTIPLQVTAGTAGNCNNS--FLKNPALYTQEVKPSENKCGEENLSFFTLPIQFGTYECKL 217

Query: 200 YIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FNCHY 251
           ++V  C  I++ K + N +   +  Q  ++    ++ GL++  +  TG         C  
Sbjct: 218 HLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKIVGGLDNRVSPYTGNSGDTPTMQCDM 277

Query: 252 LVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC-QPP 310
           L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC   P
Sbjct: 278 LQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDYAVDQACLSTP 336

Query: 311 YCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP--Y 368
            C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P  +
Sbjct: 337 GCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKF 396

Query: 369 GRCPTAA-DINTPDVP 383
           GRCP AA + + P +P
Sbjct: 397 GRCPLAAKEESIPKIP 412

>dbj|BAA09760.1| (D63473) HE [Influenzavirus C]
          Length = 609

 Score =  105 bits (261), Expect = 1e-21
 Identities = 105/379 (27%), Positives = 165/379 (42%), Gaps = 46/379 (12%)

Query: 34  WFLFGDSRSDCNHVVNTNPRNYSYMDLNPALCDSGKISSKAGNSIFRSFHFTDF---YNY 90
           W  FGDSR+D ++  +  PR+    D++    D  K  S +G S+  S         Y Y
Sbjct: 19  WIGFGDSRTDQSN--SAFPRS---ADVSAKTAD--KFRSLSGGSLMLSMFGPPGKVDYLY 71

Query: 91  TGEGQQIIFYEGVNFTPYHAFKCTTSGSNDIWMQNKGLFYTQVYKNMAVYRSLTFVN--- 147
            G G+  +FYEGVN++P+ A  C      DI +     F   +Y+  +    ++ VN   
Sbjct: 72  QGCGKHKVFYEGVNWSPHAAIDCYRKNWTDIKLN----FQKSIYELASQSHCMSLVNALD 127

Query: 148 --VPY-VYNGSAQSTALCKSGSLVLNNPAYIAREANFGDY--------YYKVEADFYLSG 196
             +P  V  G A++   C +    L NPA   +E    +         ++ +   F    
Sbjct: 128 KTIPLQVTKGVAKN---CNNS--FLKNPALYTQEVKPLEQICGEENLAFFTLPTQFGTYE 182

Query: 197 CDEYIVPLC--IFNGKFLSNTKYYDDS-QYYFNKDTGVIYGLNSTETITTGFD-----FN 248
           C  ++V  C  I++ K + N +   +  Q  ++    V+ GL++  +  TG         
Sbjct: 183 CKLHLVASCYFIYDSKEVYNKRGCGNYFQVIYDSSGKVVGGLDNRVSPYTGNSGDTPTMQ 242

Query: 249 CHYLVLPSGNYLAISNELLLTVPTKAICLNKRKDFTPVQVVHSRWNNARQSDNMTAVAC- 307
           C  L L  G Y   S+   L +P ++ C +  K+  PV  V S W   R+SD     AC 
Sbjct: 243 CDMLQLKPGRYSVRSSPRFLLMPERSYCFDM-KEKGPVTAVQSIWGKGRESDTAVDQACL 301

Query: 308 QPPYCYFRNSTTNYVGVYDINHGDAGFTSILSGLLYDSPCFSQQGVFRYNNVSSVWPLYP 367
             P C        Y+G  D +HGD     +LSGL Y++ C SQ G     +  +   L P
Sbjct: 302 STPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEEYLLP 361

Query: 368 --YGRCPTAA-DINTPDVP 383
             +GRCP AA + + P +P
Sbjct: 362 PKFGRCPLAAKEESIPKIP 380

  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF
    Posted date:  Feb 19, 2002  1:20 AM
  Number of letters in database: 276,611,002
  Number of sequences in database:  883,557
  
Lambda     K      H
   0.323    0.141    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 261,231,047
Number of Sequences: 883557
Number of extensions: 12173611
Number of successful extensions: 24976
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 24612
Number of HSP's gapped (non-prelim): 99
length of query: 421
length of database: 276,611,002
effective HSP length: 123
effective length of query: 298
effective length of database: 167,933,491
effective search space: 50044180318
effective search space used: 50044180318
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)